AIM To study the distribution of allele frequencies of 15 short tandem repeat (STR) loci in a representative sample of Croatian population. METHODS A total of 195 unrelated Caucasian individuals born in Croatia, from 14 counties and the City of Zagreb, were sampled for the analysis. All the tested individuals were voluntary donors. Buccal swab was used as the DNA source. AmpFlSTR Identifiler was applied to simultaneously amplify 15 STR loci. Total reaction volume was 12.5 microL. The PCR amplification was carried out in PE Gene Amp PCR System Thermal Cycler. Electrophoresis of the amplification products was preformed on an ABI PRISM 3130 Genetic Analyzer. After PCR amplification and separation by electrophoresis, raw data were compiled, analyzed, and numerical allele designations of the profiles were obtained. Deviation from Hardy-Weinberg equilibrium, observed and expected heterozygosity, power of discrimination, and power of exclusion were calculated. Bonferroni's correction was used before each comparative analysis. RESULTS We compared Croatian data with those obtained from geographically neighboring European populations. The significant difference (at P<0.01) in allele frequencies was recorded only between Croatian and Slovenian populations for vWA locus. There was no significant deviation from Hardy-Weinberg equilibrium for all the observed loci. CONCLUSION Obtained population data concurred with the expected "STR data frame" for this part of Europe.
Many historical episodes marked Bosnia and Herzegovina as a significant ethnic crossroads, which makes it a very interesting site for various population studies. The first stages of these complex investigations were based on observations of numerous phenotype markers. The following phase, which was relatively brief, was dominated by the use of different cytogenetic markers. Finally, at the beginning of this century, the molecular-genetic diversity of the BiH population became the focus of modern research. Autosomal and Y-STR markers, together with mitochondrial haplogroup (Hg) diversity were initially used in the examination of isolated groups, as well as the whole population of modern Bosnia and Herzegovina. The most recent study describes the distribution of Y-chromosome haplogroups in the three main ethnic groups in Bosnia and Herzegovina, and suggests a preliminary hypothesis for the process of peopling this area.
POPULATION: We have analyzed the distribution of allele frequencies at two short tandem repeats loci (D2S1338 and D19S433) in a multinational sample of Bosnia and Herzegovina (B&H) residents. A total of 110 unrelated male and female individuals (Caucasians) from different regions of B&H were sampled for the analysis. We ensured that the sample reflected approximate proportional participation of the three main ethnic groups in the population of B&H (Bosniacs‐Muslim [45%], Serbs [34%], Croats [21%]).
Genetic heterogenity of two local human population from the area of northeast Bosnia (Bosanska Bijela and Memic'i) regarding of four the biochemical-physiological characteristic (ABO blood groups, PTC tasting, red and green colour vision) was studied. Special attention in this study was paid to the analysis of temporal changes in genetic structure of two local population. The analysed genetic data were collected by direct observation and survey of schoolchildren from two temporal periods (1974.75. and 2001./02. year). Data processing included: estimation of recessive phenotypes frequency for each observed characteristic by locality, analysis Wahlund, s variance analysis of the complex genetic distance, analysis of correlation of genetic distance and some possible factors of the genetic heterogeneity. Thirty years after the last analysis of genetic structure of these two populations regarding of four the biochemical-physiological characteristics, we found that the population of Bosanska Bijela retained higher genetic similarity in two temporal periods compared to the population of Memic'i and that the this two populations show a higher genetic similarity when compared to period 1974./75.
The variation at 28 Y‐chromosome biallelic markers was analysed in 256 males (90 Croats, 81 Serbs and 85 Bosniacs) from Bosnia‐Herzegovina. An important shared feature between the three ethnic groups is the high frequency of the “Palaeolithic” European‐specific haplogroup (Hg) I, a likely signature of a Balkan population re‐expansion after the Last Glacial Maximum. This haplogroup is almost completely represented by the sub‐haplogroup I‐P37 whose frequency is, however, higher in the Croats (∼71%) than in Bosniacs (∼44%) and Serbs (∼31%). Other rather frequent haplogroups are E (∼15%) and J (∼7%), which are considered to have arrived from the Middle East in Neolithic and post‐Neolithic times, and R‐M17 (∼14%), which probably marked several arrivals, at different times, from eastern Eurasia. Hg E, almost exclusively represented by its subclade E‐M78, is more common in the Serbs (∼20%) than in Bosniacs (∼13%) and Croats (∼9%), and Hg J, observed in only one Croat, encompasses ∼9% of the Serbs and ∼12% of the Bosniacs, where it shows its highest diversification. By contrast, Hg R‐M17 displays similar frequencies in all three groups. On the whole, the three main groups of Bosnia‐Herzegovina, in spite of some quantitative differences, share a large fraction of the same ancient gene pool distinctive for the Balkan area.
All 193 tested individuals have been involved in legal proceedings concerning various forensic testing. Buccal swabs have been taken as the DNA source and Chelex procedure was used for DNA extraction (1). The PowerPlex 16 kit (Promega Corp., Madison, WI) has been used to simultaneously amplify by PCR 15 STR loci. The STR loci are: D3S1358, TH01, D21S11, D18S51, Penta E, D5S818, D13S317, D7S820, D16S539, CSF1PO, Penta D, vWA, D8S1179, TPOX and FGA. Similar amounts of DNA have been used in all PCR reactions. Amplification was carried out as described previously (2).
POPULATION: We have analyzed the distribution of allele frequencies at 12 Y-chromosornal short tandem repeats loci (DYS 19, DYS385a, DYS385b. DYS389I. DYS389II, DYS390, DYS391, DYS392, DYS393, DYS437, DYS438 and DYS439) in the representative sample of Bosnian and Herzegovinians. A total of 100 unrelated male individuals (Caucasians) from different regions of Bosnia and Herzegovina have been sampled for the analysis. Samples were collected with a respect to the approximate proportional participation of three main ethnic groups in Bosnia and Herzegovina [Bosniacs-Muslim (35). Serbs (31), Croats (34)].
Fifteen autosomal STR loci (D3S1358, TH01, D21S11, D18S51, Penta E, D5S818, D13S317, D7S820, D16S539, CSF1PO, Penta D, VWA, D8S1179, TPOX, and FGA) were studied in three geographically close but isolated populations from the Bosnian mountain area. The three villages are Bobovica, Dejcici, and Lukomir. DNA was obtained from 83 individuals, and the allele frequencies and genetic diversity among the three sample groups were compared. In addition, seven of the STR loci (CSF1PO, D13S317, D3S1358, D5S818, D7S820, FGA, TH01) were used in a comparative population analysis of the Bjelas;aknica-Treskavica region and the Adriatic islands of Brac, Hvar, and Korcula. Although the sample sizes are relatively small, the observed variation within any of the small isolated populations is high and comparable to less isolated groups. In addition, even though the populations are geographically isolated, the STR data are similar among the populations. The most significant frequency differences were observed at the TH01 locus. Although the specific allele distributions in any untyped population cannot be determined a priori, we find support for a high degree of diversity for the STR loci in most populations. In addition, the multiple locus profile is highly informative not only for various population studies but also for forensic studies, even when specific population data are not available.
An exposure to extreme trauma events leads to posttraumatic stress disorder (PTSD) in up to 14-50% of war survivors. Recent findings suggest that genetic factors could play a certain role in PTSD development. In order to illustrate this possibility, we present results of a pilot study on gender specific sample of Sarajevo civilians immediately after the war cessation. During the period 1992-1995, Sarajevo civilians experienced continuous life threatening events with a great risk of developing PTSD in such conditions. Our study included 100 women adjusted to same socio-demographic characteristics. All women were interviewed using Harvard Trauma Questionnaire (HTQ) and divided into two groups (domestic and returnees) according to exposure length to extreme war life events of six or forty-three months. Above 50% of total analysed sample fulfilled criteria for PTSD. Regarding duration in trauma exposure no significant difference between these two groups were found. The only significant predictor found was physical abuse (p>0.01) that still cannot explain why some women develop PTSD while others not. Several years after the war, PTSD frequencies are decreased and disorder became chronic and more severe. However, the PTSD prevalence remains high when compared to general population rates. Therefore, Sarajevo population being exposed for almost four years to extreme war life events represents unique model for comparative research on PTSD etiology within the light of latest findings in molecular genetics of PTSD.
Observation of micronuclei presents reliable method for evaluation of genotoxicity effects on chromosomal level. One of genotoxins evidenced in the environment as impact of the last conflict in Bosnia and Herzegovina is depleted uranium. This research included an evaluation of genctic load in lymphocytes of individuals from population exposed to depleted uranium and the control group in correlation with sex, age and smoking habit. Results have shown increased micronuclei formation within exposed population and their statistically significant correlation with ages.
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